PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG007681.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 177aa    MW: 18793 Da    PI: 5.2322
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG007681.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.5e-151461355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r  ++ g+Wv+eIr+p++   ++r++lg+f  +e+Aa+a++ a+++l+g
  CCG007681.1 14 YHGIR--SRGGKWVSEIREPRK---TTRIWLGTFPKPEMAAAAYDVAALALKG 61
                 78885..779*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.55E-171370IPR016177DNA-binding domain
SMARTSM003801.6E-241375IPR001471AP2/ERF domain
PROSITE profilePS5103218.7551369IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-251371IPR001471AP2/ERF domain
PfamPF008473.8E-81461IPR001471AP2/ERF domain
CDDcd000181.84E-131471No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MATTSSNSKR HPMYHGIRSR GGKWVSEIRE PRKTTRIWLG TFPKPEMAAA AYDVAALALK  60
GNGAVLNFPS SAGTYPVPAT ASSTDIRKAA AAAAAVKKAE LSYNEALVDQ PGNDHNAIGA  120
YLASSGEEFV DEEALFDMPN LLVDMAGGML LSPPRITSPP SDDSQGNSDG ESLWSYF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011014149.11e-128PREDICTED: ethylene-responsive transcription factor ERF026-like
RefseqXP_011014150.11e-128PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9FJ902e-52ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLB9GKP11e-111B9GKP1_POPTR; AP2 domain-containing family protein
STRINGPOPTR_0001s08740.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-48ERF family protein